yqeC [2019-07-04 14:11:57]

similar to 6-phosphogluconate dehydrogenase

locus: BSU25730

pI: 5.82

mw: 32.62 kDa

protein length: 297 aa

gene length: 894 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]
• [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

Gene

Coordinates: 2,650,487 → 2,651,380

The protein

Protein family

• 6-phosphogluconate dehydrogenase family (with [protein|C6CB4993032D8C2CC79A06C67925096F0AFE48CB|YqeC] and [protein|7E7187AA2DC172018A63A7B9CE48124F30311639|GntZ], according to UniProt)

Paralogous protein(s)

• [protein|7E7187AA2DC172018A63A7B9CE48124F30311639|GntZ]

Structure

• [PDB|4E21] (from Geobacter Metallireducens 37% identity)

Expression and Regulation

Operons

• genes: [gene|C6CB4993032D8C2CC79A06C67925096F0AFE48CB|yqeC]
  description: [pubmed|22383849]

  regulation

  • expressed during [SW|sporulation] [pubmed|22383849]

Biological materials

Mutant

• BKE25730 (Δ[gene|C6CB4993032D8C2CC79A06C67925096F0AFE48CB|yqeC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE25730 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCTGTTCCTCCTGATT, downstream forward: _UP4_AAGTAAGGGGGCCAACAAGC
• BKK25730 (Δ[gene|C6CB4993032D8C2CC79A06C67925096F0AFE48CB|yqeC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK25730 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCTGTTCCTCCTGATT, downstream forward: _UP4_AAGTAAGGGGGCCAACAAGC